How do I efficiently handle all the documentation required for accreditation?

One method of handling required documentation and paperwork required for accreditation is to utilize a Learning Management System (such as Moodle, Blackboard, Angel, etc) and require students to submit assignments through the system.  Such a LMS allows the instructor to annotate and grade assignments.  The system also likely allows for analyses of assessments.  Another method of handling the required documentation is to utilize a software program such as Microsoft Excel or Access.